PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01352.1.g00200.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 1241aa    MW: 134325 Da    PI: 9.8354
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01352.1.g00200.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP223.91e-071371652755
                           AP2  27 krkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   +  r ++g+f+tae Aa+a++aa+++l g
  Zpz_sc01352.1.g00200.1.am.mk 137 RGDRLWVGTFDTAEAAARAHDAAMLALCG 165
                                   4589********************99865 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103213.459113174IPR001471AP2/ERF domain
SMARTSM003805.1E-5113180IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.3E-12132176IPR001471AP2/ERF domain
PfamPF008471.2E-4133165IPR001471AP2/ERF domain
SuperFamilySSF541714.18E-7136175IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1241 aa     Download sequence    Send to blast
MVYPVQENPG RIRDLALEHE PRLSHVWVSQ PGTRRRIQFV SSTRSGERTK PSTSRRRHCY  60
ASTARLAAVG VRNTGSRAMS TYKYERARAH PAQNHQTRTE QTRSRAGRWS SMDHKGVTEP  120
PASPSSGGGQ RDDGRPRGDR LWVGTFDTAE AAARAHDAAM LALCGGSFNG LNFADSAWLL  180
HVQTGGALPD VQRAATEAVA EFMRRHGGGA AASSAPVPQP AASASTAMSQ HETAMEFDFL  240
AEGLLMEPPP TAVECPEDEE CAADGMELGS FVYLPSSAGS RHAASGRDEC RGDAESTRRR  300
SISLRSSIRT RRGTGRRMAP RVGFSKCETD VAKGGVLSGH PVHRMAAAAE GCRTRPAEGK  360
SCLLSCCAAH GPPSASTASC ADNSEPETNV PRHRPAHGPK HIFIPPCASP VDPPRMEFYL  420
WATSQVRLPY TVGSTSFCPV LRGRPGLSIQ RFNPCEGAKN RCLWTVPQLP VAQFRLTFSP  480
SPSPPSPFPL AAHGTVGEWR LVSSTTNFCR PKKRKHTRGE TFVTATGRTS PRRRRRRTGS  540
REPPRKRVVR MSEISLLLVV GMNQSTDLRG ASHGGGPGIP ASPSLNRSPG CGPRPTERDG  600
TFWWCLRYTP NRAAVFLLPP CPRQGLARPD GGHCCPDLWL LSLWVVRGRQ QAEALALTSI  660
ATTSKQQGAT RPPSAAGRSK RRRCRDRTRR GSLGTAPAAA PHLAESPSPE ATMLVLINKY  720
LRRTKARTGR EGKNKHGMPP GSNGGEDHMC IPGCVPVRAS KRAAAAASVT TTARTSRHNF  780
VTAAASGLLA GSRFTNHESL PALPDAYADF VAAFPQYGAF AQADAIRGEE YRHLDRHVCL  840
DYTGMNASVP STSSAAAAWQ PPFFDIAYKS VSLRTQCEGD GAAKGPAGVG PAITKRIMAS  900
LKIPEEEYTM LLTVYDYESE AAGAMAESAR RRGADVASAT FSWPSMRIHA ADLRKKLARG  960
RRRGGHRGLF VYPYLWMSAA HEQGWHDLDT FGLSLLRPDF INPSGFAGLF VRNIGIVSIV  1020
PARRCFPKLA EQGEDEFNVD TTTSFSGPLS AADAADNSDA SEEIREVDAS ENGGAEPEAA  1080
LFDAETEGQS NETEGLDHAD ALGLIAIGNR LRCISNWLVV ALQKLRYPHG EHGHPLFERG  1140
PSLAFNVFDW KGERLADRYN ISLSCGFLRN IWFADKTPGD AGAASATGGK RRKEAAAGDV  1200
GIFVVNASLG LWAFVAKFLD ADFVEKERWR YTALNQKTVE V
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1512534KRKHTRGETFVTATGRTSPRRRR
2527536RTSPRRRRRR
3532537RRRRRT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126161e-51CP012616.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 8 sequence.